WormBase Tree Display for Variation: WBVar00241307
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WBVar00241307 | Name | Public_name | r274 | ||
---|---|---|---|---|---|
Other_name | F11C3.3.1:c.2272G>T | ||||
CE09349:p.Gly758Ter | |||||
HGVSg | CHROMOSOME_I:g.14859956C>A | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | TR | ||||
Status | Live | ||||
Affects | Gene | WBGene00006789 | |||
Transcript | F11C3.3.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | F11C3.3.1:c.2272G>T | ||||
HGVSp | CE09349:p.Gly758Ter | ||||
cDNA_position | 2304 | ||||
CDS_position | 2272 | ||||
Protein_position | 758 | ||||
Exon_number | 7/11 | ||||
Codon_change | Gga/Tga | ||||
Amino_acid_change | G/* | ||||
Genetics | Interpolated_map_position | I | 27.9609 | ||
Reference | WBPaper00016549 | ||||
WBPaper00014397 | |||||
Remark | Corrected the original G-A annotation ti be like the published G-T. | Curator_confirmed | WBPerson1983 | ||
WARNING: The annotated Glycine (758) does not match the published position (761) so experimental validation is suggested before additional experiments are designed. | Curator_confirmed | WBPerson1983 | |||
Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006789 Opal_UGA G(758) to stop | |||||
Method | Substitution_allele |