WormBase Tree Display for Variation: WBVar00241391
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| WBVar00241391 | Evidence | Paper_evidence | WBPaper00005723 | ||
|---|---|---|---|---|---|
| Name | Public_name | r860 | |||
| Other_name | CE25134:p.Gln17Ter | ||||
| W02D3.8.1:c.49C>T | |||||
| HGVSg | CHROMOSOME_I:g.6736104G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | W02D3 | |
| Flanking_sequences | gtcactgaaaagttcaaacgatattgtaat | aactggaaaaatacggccaaactgaaaatg | |||
| Mapping_target | W02D3 | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00034942 | ||||
| WBStrain00034944 | |||||
| Laboratory | TR | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00004883 | |||
| Transcript | W02D3.8.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | W02D3.8.1:c.49C>T | ||||
| HGVSp | CE25134:p.Gln17Ter | ||||
| cDNA_position | 58 | ||||
| CDS_position | 49 | ||||
| Protein_position | 17 | ||||
| Exon_number | 2/7 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| Interactor | WBInteraction000519069 | ||||
| WBInteraction000519085 | |||||
| Genetics | Interpolated_map_position | I | 1.3019 | ||
| Mapping_data | In_2_point | 4745 | |||
| In_multi_point | 1689 | ||||
| 1891 | |||||
| 1892 | |||||
| Description | Phenotype (5) | ||||
| Reference | WBPaper00014415 | ||||
| WBPaper00004325 | |||||
| WBPaper00001192 | |||||
| WBPaper00001813 | |||||
| WBPaper00013850 | |||||
| Method | Substitution_allele |
