WormBase Tree Display for Variation: WBVar00241440
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WBVar00241440 | Evidence | Paper_evidence | WBPaper00004128 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | r974 | |||||
Other_name | CE12112:p.Trp996Ter | ||||||
K11C4.3b.1:c.2781G>A | |||||||
K11C4.3a.1:c.2781G>A | |||||||
K11C4.3c.1:c.2988G>A | |||||||
CE28604:p.Trp927Ter | |||||||
CE48478:p.Trp927Ter | |||||||
CE47919:p.Trp927Ter | |||||||
K11C4.3d.1:c.2781G>A | |||||||
HGVSg | CHROMOSOME_V:g.6885431G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | K11C4 | |||
Flanking_sequences | tcaccgtcaaaacaagctcaacgctcgctg | gctcaacttcgcgacatggtcgatcaaaag | |||||
Mapping_target | K11C4 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00004128 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | TR | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006803 | |||||
Transcript | K11C4.3c.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | K11C4.3c.1:c.2988G>A | ||||||
HGVSp | CE12112:p.Trp996Ter | ||||||
cDNA_position | 3049 | ||||||
CDS_position | 2988 | ||||||
Protein_position | 996 | ||||||
Exon_number | 6/13 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
K11C4.3d.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | K11C4.3d.1:c.2781G>A | ||||||
HGVSp | CE48478:p.Trp927Ter | ||||||
cDNA_position | 2781 | ||||||
CDS_position | 2781 | ||||||
Protein_position | 927 | ||||||
Exon_number | 6/14 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
K11C4.3a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | K11C4.3a.1:c.2781G>A | ||||||
HGVSp | CE28604:p.Trp927Ter | ||||||
cDNA_position | 2829 | ||||||
CDS_position | 2781 | ||||||
Protein_position | 927 | ||||||
Exon_number | 7/14 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
K11C4.3b.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | K11C4.3b.1:c.2781G>A | ||||||
HGVSp | CE47919:p.Trp927Ter | ||||||
cDNA_position | 2833 | ||||||
CDS_position | 2781 | ||||||
Protein_position | 927 | ||||||
Exon_number | 7/16 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
Genetics | Interpolated_map_position | V | 0.41621 | ||||
Reference | WBPaper00004128 | ||||||
Method | Substitution_allele |