WormBase Tree Display for Variation: WBVar00241476
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| WBVar00241476 | Evidence | Paper_evidence | WBPaper00030886 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ra115 | |||||
| Other_name | CE04392:p.Gln51Ter | ||||||
| F14D12.2.1:c.151C>T | |||||||
| HGVSg | CHROMOSOME_X:g.5593368C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F14D12 | |||
| Flanking_sequences | aaaaattgcaaaaaaatttttagatgtgct | aatgctttgagccattcccagacggcatct | |||||
| Mapping_target | F14D12 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00030886 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | DM | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006826 | |||||
| Transcript | F14D12.2.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F14D12.2.1:c.151C>T | ||||||
| HGVSp | CE04392:p.Gln51Ter | ||||||
| cDNA_position | 180 | ||||||
| CDS_position | 151 | ||||||
| Protein_position | 51 | ||||||
| Exon_number | 3/9 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000502988 | ||||||
| Genetics | Interpolated_map_position | X | -4.49498 | ||||
| Reference | WBPaper00030886 | ||||||
| Method | Substitution_allele |
