Questions, Feedback & Help

Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00242214

expand all nodes | collapse all nodes | view schema

WBVar00242214	Name	Public_name	s1775
	Sequence_details	SeqStatus	Pending_curation
	Variation_type	Allele
	Origin	Species	Caenorhabditis elegans
		Strain	WBStrain00000669
		Laboratory	BC
		Status	Live
	Affects	Gene	WBGene00001204
		Interactor	WBInteraction000501611
			WBInteraction000501612
			WBInteraction000501613
			WBInteraction000501615
			WBInteraction000501704
			WBInteraction000541703
	Description	Phenotype	WBPhenotype:0000006	Paper_evidence	WBPaper00002924
				Curator_confirmed	WBPerson712
				Remark	Animals are 99% (n=99) egg-laying defective as a trans-heterozyote with n578.	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				Recessive	Paper_evidence	WBPaper00002924
					Curator_confirmed	WBPerson712
				Variation_effect	Probable_null_via_phenotype	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				EQ_annotations	Life_stage	WBls:0000057	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
				Phenotype_assay	Treatment	Treatment: L4 animals were placed on separate plates and scored for ability to lay eggs onto the plate over a 3- to 4-day period.	Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
					Genotype	egl-38(n578) unc-22(s7) unc-31(e169)/ egl-38(s1775) unc-22(s7) unc-31(e169)	Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
			WBPhenotype:0000062	Paper_evidence	WBPaper00023860
					WBPaper00002924
				Curator_confirmed	WBPerson712
				Remark	Animals arrest (100%, n=218) as late embryo/L1 larva as homozyogote and when trans-heterozygote with eDf19. Viablity weakly increases as trans-heterozygote with sy294 and increases to 95% (n=283) as trans-heterozygote with n578.	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				Penetrance	Complete		Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
				Recessive	Paper_evidence	WBPaper00002924
					Curator_confirmed	WBPerson712
				Variation_effect	Null	Paper_evidence	WBPaper00023860
						Curator_confirmed	WBPerson712
					Probable_null_via_phenotype	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				EQ_annotations	Life_stage	WBls:0000021	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
						WBls:0000024	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
				Phenotype_assay	Genotype	unc-22	Paper_evidence	WBPaper00023860
							Curator_confirmed	WBPerson712
						egl-38(s1775) unc-22(s7) unc-31(e169)	Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
			WBPhenotype:0000070	Paper_evidence	WBPaper00023860
					WBPaper00002924
				Curator_confirmed	WBPerson712
				Remark	100% (n=87) s1775/n578 males exhibit a deformed tail and copulatory structures, as scored by Nomarski optics.	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				Recessive	Paper_evidence	WBPaper00002924
					Curator_confirmed	WBPerson712
				Variation_effect	Null	Paper_evidence	WBPaper00023860
						Curator_confirmed	WBPerson712
					Probable_null_via_phenotype	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				EQ_annotations	Anatomy_term	WBbt:0005741	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
					Life_stage	WBls:0000056	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
				Phenotype_assay	Genotype	unc-22	Paper_evidence	WBPaper00023860
							Curator_confirmed	WBPerson712
						egl-38(n578) dpy-20(e1282)/egl-38(s1775) dpy-20(e1282)	Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
			WBPhenotype:0000306	Paper_evidence	WBPaper00023860
				Curator_confirmed	WBPerson712
				Variation_effect	Null	Paper_evidence	WBPaper00023860
						Curator_confirmed	WBPerson712
				Phenotype_assay	Genotype	unc-22; lin-48::gfp	Paper_evidence	WBPaper00023860
							Curator_confirmed	WBPerson712
			WBPhenotype:0000430	Paper_evidence	WBPaper00002924
				Curator_confirmed	WBPerson712
				Remark	s1775/n578 males exhibit deformed copulatory structures, as scored by Nomarski optics.	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				Recessive	Paper_evidence	WBPaper00002924
					Curator_confirmed	WBPerson712
				Variation_effect	Probable_null_via_phenotype	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				EQ_annotations	Anatomy_term	WBbt:0005312	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
					Life_stage	WBls:0000056	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
				Phenotype_assay	Genotype	egl-38(n578) dpy-20(e1282)/egl-38(s1775) dpy-20(e1282)	Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
			WBPhenotype:0000640	Paper_evidence	WBPaper00023860
				Curator_confirmed	WBPerson712
				Variation_effect	Null	Paper_evidence	WBPaper00023860
						Curator_confirmed	WBPerson712
				Phenotype_assay	Genotype	unc-22	Paper_evidence	WBPaper00023860
							Curator_confirmed	WBPerson712
		Phenotype_not_observed	WBPhenotype:0001478	Paper_evidence	WBPaper00002924
				Curator_confirmed	WBPerson712
				Remark	Animals generally elongate.	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				Penetrance	Incomplete		Paper_evidence	WBPaper00002924
							Curator_confirmed	WBPerson712
				Recessive	Paper_evidence	WBPaper00002924
					Curator_confirmed	WBPerson712
				Variation_effect	Probable_null_via_phenotype	Paper_evidence	WBPaper00002924
						Curator_confirmed	WBPerson712
				EQ_annotations	Life_stage	WBls:0000015	PATO:0000460	Paper_evidence	WBPaper00002924
								Curator_confirmed	WBPerson712
	Reference	WBPaper00002924
		WBPaper00017242
		WBPaper00015245
		WBPaper00023860
		WBPaper00030659
	Method	Allele