WormBase Tree Display for Variation: WBVar00242587
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WBVar00242587 | Evidence | Paper_evidence | WBPaper00003655 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | sa525 | ||||||
Other_name | CE27798:p.Gln367Ter | |||||||
C08B11.4.1:c.1099C>T | ||||||||
HGVSg | CHROMOSOME_II:g.8030897G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C08B11 | ||||
Flanking_sequences | tcaatgtatacaaatggaagtgagattctt | aatcaaaaaaaaatgatcgagaaatcaatt | ||||||
Mapping_target | C08B11 | |||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003655 | |||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022800 | |||||||
Laboratory | JT | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003813 | ||||||
Transcript | C08B11.4.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | C08B11.4.1:c.1099C>T | |||||||
HGVSp | CE27798:p.Gln367Ter | |||||||
cDNA_position | 1105 | |||||||
CDS_position | 1099 | |||||||
Protein_position | 367 | |||||||
Exon_number | 9/15 | |||||||
Codon_change | Caa/Taa | |||||||
Amino_acid_change | Q/* | |||||||
Genetics | Interpolated_map_position | II | 0.648767 | |||||
Description | Phenotype_not_observed | WBPhenotype:0001426 | Paper_evidence | WBPaper00004883 | ||||
Curator_confirmed | WBPerson712 | |||||||
Variation_effect | Null | Paper_evidence | WBPaper00004883 | |||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Genotype | arIs37 | Paper_evidence | WBPaper00004883 | ||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00004883 | |||||||
Method | Substitution_allele |