WormBase Tree Display for Variation: WBVar00248707
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WBVar00248707 | Evidence | Paper_evidence | WBPaper00004695 | ||
---|---|---|---|---|---|
Name | Public_name | st43 | |||
Other_name | CE03924:p.Trp607Ter | ||||
C04F6.4a.1:c.1820delinsA | |||||
HGVSg | CHROMOSOME_X:g.3408835delinsT | ||||
Sequence_details | SMap | S_parent | Sequence | C04F6 | |
Flanking_sequences | cggccggacaagattcgaatatcaagttct | aatgtacctttttaagtcgagaagcttttt | |||
Mapping_target | C04F6 | ||||
Type_of_mutation | Substitution | gg | rr | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | RW | ||||
Status | Live | ||||
Affects | Gene | WBGene00006810 | |||
Transcript | C04F6.4a.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | C04F6.4a.1:c.1820delinsA | ||||
HGVSp | CE03924:p.Trp607Ter | ||||
cDNA_position | 1821-1822 | ||||
CDS_position | 1820-1821 | ||||
Protein_position | 607 | ||||
Exon_number | 7/8 | ||||
Codon_change | tGG/tAG | ||||
Amino_acid_change | W/* | ||||
Interactor | WBInteraction000518616 | ||||
Genetics | Interpolated_map_position | X | -10.3478 | ||
Reference | WBPaper00022801 | ||||
Method | Substitution_allele |