WormBase Tree Display for Variation: WBVar00248987
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WBVar00248987 | Evidence | Paper_evidence | WBPaper00004721 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | sy429 | |||||
Other_name | C09E10.2e.1:c.742-1G>A | ||||||
C09E10.2b.1:c.841-1G>A | |||||||
C09E10.2d.1:c.840+200G>A | |||||||
C09E10.2c.1:c.834+200G>A | |||||||
C09E10.2a.1:c.835-1G>A | |||||||
HGVSg | CHROMOSOME_X:g.988733C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | C09E10 | |||
Flanking_sequences | caatttccaacaacgtttcccccatttcta | atttcgcgcaatatcgtagttgccaaacac | |||||
Mapping_target | C09E10 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00024616 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | PS | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000958 | |||||
Transcript | C09E10.2d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | C09E10.2d.1:c.840+200G>A | ||||||
Intron_number | 6/13 | ||||||
C09E10.2c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | C09E10.2c.1:c.834+200G>A | ||||||
Intron_number | 6/13 | ||||||
C09E10.2a.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2a.1:c.835-1G>A | ||||||
Intron_number | 7/17 | ||||||
C09E10.2e.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2e.1:c.742-1G>A | ||||||
Intron_number | 5/14 | ||||||
C09E10.2b.1 | VEP_consequence | splice_acceptor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | C09E10.2b.1:c.841-1G>A | ||||||
Intron_number | 7/17 | ||||||
Genetics | Interpolated_map_position | X | -18.8703 | ||||
Description (2) | |||||||
Reference | WBPaper00004721 | ||||||
Remark | This allele has the same mutation as sy425 | Paper_evidence | WBPaper00024616 | ||||
Method | Substitution_allele |