WormBase Tree Display for Variation: WBVar00249826

WBVar00249826 Name: Public_name: tm798
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: Y17G7A
    Flanking_sequences: cggagaacgctgtcaaaaatgagacggatt acggatttttgggggaatttgtaattaaaa
    Mapping_target: Y17G7A
    Source_location: 7 CHROMOSOME_II 11916750 11918029 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TTTNTTTTTGCTCCAAATTCCCNCAGNTTCNGGTTNCCCCAACCCTGGTTCCCGTANTANANNTTTGATATTAT
      Deletion
    PCR_product: tm798_external
      tm798_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 798
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001977
      WBGene00003015
    Transcript: Y17G7A.1.1 VEP_consequence: coding_sequence_variant,3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 189-?
        CDS_position: 188-?
        Protein_position: 63-?
        Exon_number: 3-4/4
      W03C9.4a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1685-?
        Exon_number: 11/11
      W03C9.4b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1903-?
        Exon_number: 13/13
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
    Phenotype_not_observed: WBPhenotype:0000643 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment from Dr. K. Subramaniam: normal locomotion. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 743/744-TTTNTTTTTGCTCCAAATTCCCNCAGNTTCNGGTTNCCCCAACCCTGGTTCCCGTANTANANNTTTGATATTAT-2021/2022 (1278 bp deletion + 74 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele