WormBase Tree Display for Variation: WBVar00252465

WBVar00252465 Name: Public_name: tm3874
    Other_name: F09E8.7b.1:c.960+74_961-24delinsA
      F09E8.7a.1:c.1035+74_1036-24delinsA
    HGVSg: CHROMOSOME_IV:g.13175553_13176068delinsT
  Sequence_details: SMap: S_parent: Sequence: F58D2
    Flanking_sequences: ggagaatctgaaattaacattttacttgtg ggaaataaggaaatgtatgactttttaatt
    Mapping_target: F58D2
    Source_location: 7 CHROMOSOME_IV 13175552 13176069 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: T
      Deletion
    PCR_product: tm3874_external
      tm3874_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 3874
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00002974
    Transcript: F09E8.7a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F09E8.7a.1:c.1035+74_1036-24delinsA
        Intron_number: 5/9
      F09E8.7b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F09E8.7b.1:c.960+74_961-24delinsA
        Intron_number: 6/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 38139/18140-T-38655/38656 (516 bp deletion + 1 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
    Old Mapping_target F09E8 updated based on the VEP analysis pipeline to F58D2.
  Method: NBP_knockout_allele