WormBase Tree Display for Variation: WBVar00275069
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| WBVar00275069 | Evidence | Paper_evidence | WBPaper00004281 | ||
|---|---|---|---|---|---|
| Name | Public_name | vs26 | |||
| Other_name | C05B5.7a.2:c.293_*185del | ||||
| C05B5.7b.1:c.293_601-140del | |||||
| C05B5.7a.1:c.293_*98+87del | |||||
| HGVSg | CHROMOSOME_III:g.10014876_10016242del | ||||
| Sequence_details | SMap | S_parent | Sequence | C05B5 | |
| Flanking_sequences | aaaaagcacgtatcatctatgaagatttca | gtgtaactaatatgcaaaagtacttgtttc | |||
| Mapping_target | C05B5 | ||||
| Type_of_mutation | Deletion | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Laboratory | LX | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00004344 | |||
| Transcript | C05B5.7a.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | C05B5.7a.2:c.293_*185del | ||||
| cDNA_position | 293-791 | ||||
| CDS_position | 293-? | ||||
| Protein_position | 98-? | ||||
| Intron_number | 1-4/4 | ||||
| Exon_number | 1-5/5 | ||||
| C05B5.7a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | C05B5.7a.1:c.293_*98+87del | ||||
| cDNA_position | 317-? | ||||
| CDS_position | 293-? | ||||
| Protein_position | 98-? | ||||
| Intron_number | 2-6/6 | ||||
| Exon_number | 2-6/7 | ||||
| C05B5.7b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | C05B5.7b.1:c.293_601-140del | ||||
| cDNA_position | 293-? | ||||
| CDS_position | 293-? | ||||
| Protein_position | 98-? | ||||
| Intron_number | 1-2/2 | ||||
| Exon_number | 1-2/3 | ||||
| Genetics | Interpolated_map_position | III | 1.53547 | ||
| Reference | WBPaper00004281 | ||||
| Method | Deletion_allele |
