WormBase Tree Display for Variation: WBVar00278505
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WBVar00278505 | Evidence | Paper_evidence | WBPaper00032952 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | n3192 | ||||||
Other_name | CE13601:p.Gln616Ter | |||||||
T12F5.4.1:c.1846C>T | ||||||||
HGVSg | CHROMOSOME_I:g.3716687G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T12F5 | ||||
Flanking_sequences | atggactgtctgaatcgagcattgagagtt | agtgtagcagtgattgttctgtgccgtatt | ||||||
Mapping_target | T12F5 | |||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00032952 | |||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00005831 | |||||||
Laboratory | MT | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003040 | ||||||
Transcript | T12F5.4.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | T12F5.4.1:c.1846C>T | |||||||
HGVSp | CE13601:p.Gln616Ter | |||||||
cDNA_position | 1943 | |||||||
CDS_position | 1846 | |||||||
Protein_position | 616 | |||||||
Exon_number | 6/10 | |||||||
Codon_change | Cag/Tag | |||||||
Amino_acid_change | Q/* | |||||||
Interactor | WBInteraction000500195 | |||||||
WBInteraction000503925 | ||||||||
Genetics | Interpolated_map_position | I | -2.83268 | |||||
Description | Phenotype | WBPhenotype:0000062 | Paper_evidence | WBPaper00036201 | ||||
Curator_confirmed | WBPerson712 | |||||||
Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00036201 | ||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00032952 | |||||||
WBPaper00036201 | ||||||||
Method | Substitution_allele |