WormBase Tree Display for Variation: WBVar00299870

WBVar00299870 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn3049
    Other_name: OH4247_143598
      T21C12.1o.1:c.602-103T>A
      T21C12.1c.1:c.*543-103T>A
      T21C12.1f.1:c.1106-103T>A
      T21C12.1h.1:c.554-103T>A
      T21C12.1e.1:c.*543-103T>A
      T21C12.1i.1:c.233-103T>A
      T21C12.1d.1:c.*543-103T>A
    HGVSg: CHROMOSOME_III:g.10532106T>A
  Sequence_details: SMap: S_parent: Sequence: T21C12
    Flanking_sequences: ACTGTAGGGGTAATATAGAAGTACTGTAGTTTTAACAGAAACTAGCTTTT TAGCCGCCCATTTTTTGGCTAAAACCCATTTTTTGAGTTTCTCATGAGAA
    Mapping_target: T21C12
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029440
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00006784
    Transcript: T21C12.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1h.1:c.554-103T>A
        Intron_number: 4/6
      T21C12.1o.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1o.1:c.602-103T>A
        Intron_number: 4/5
      T21C12.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1i.1:c.233-103T>A
        Intron_number: 1/2
      T21C12.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1d.1:c.*543-103T>A
        Intron_number: 16/17
      T21C12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1c.1:c.*543-103T>A
        Intron_number: 17/18
      T21C12.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1e.1:c.*543-103T>A
        Intron_number: 18/19
      T21C12.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T21C12.1f.1:c.1106-103T>A
        Intron_number: 9/11
  Genetics: Map: III
  Reference: WBPaper00036201
  Method: WGS_Hobert