WormBase Tree Display for Variation: WBVar00301088

WBVar00301088 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn4267
    Other_name: OH4303_80468
      Y54G2A.17a.2:c.1369-773A>G
      Y54G2A.17b.1:c.1429-773A>G
      Y54G2A.17a.3:c.1369-773A>G
      Y54G2A.17a.1:c.1369-773A>G
    HGVSg: CHROMOSOME_IV:g.2874184T>C
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: GCGGAAAACAAAGCAAGATAAATGGCCGCTGAAACTTGTCTGCCCCTCGG CATGGCCTAGAAACCACTTTTCCTCGTCCCTCGTGAGGAAAAAGTTGCAG
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029448
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00021882
    Transcript: Y54G2A.17a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17a.3:c.1369-773A>G
        Intron_number: 5/7
      Y54G2A.17b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17b.1:c.1429-773A>G
        Intron_number: 6/7
      Y54G2A.17a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17a.2:c.1369-773A>G
        Intron_number: 6/8
      Y54G2A.17a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17a.1:c.1369-773A>G
        Intron_number: 6/8
  Genetics: Map: IV
  Reference: WBPaper00036201
  Method: WGS_Hobert