WormBase Tree Display for Variation: WBVar00307501
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| WBVar00307501 | Evidence | Paper_evidence | WBPaper00036201 | ||
|---|---|---|---|---|---|
| Name | Public_name | otn10680 | |||
| Other_name | OH8421_17254 | ||||
| ZK524.2c.1:c.799-2196C>T | |||||
| ZK524.2f.1:c.1831-2196C>T | |||||
| ZK524.2d.1:c.1822-1093C>T | |||||
| ZK524.2i.1:c.1831-2196C>T | |||||
| ZK524.2k.1:c.1777-2196C>T | |||||
| ZK524.2h.1:c.799-2196C>T | |||||
| ZK524.2e.1:c.1822-2196C>T | |||||
| ZK524.2j.1:c.1786-2196C>T | |||||
| ZK524.2a.1:c.1822-2196C>T | |||||
| HGVSg | CHROMOSOME_I:g.7441836C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK524 | |
| Flanking_sequences | TTTGACGTCAGTGAGCCTTTTTTCAAATACGGGGTTTTAAAATTATTATC | TGACTCACGTTATTTGAAATATACTTCTCAAATATTCATTTTCCAGACAG | |||
| Mapping_target | ZK524 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00029552 | ||||
| Laboratory | OTN | ||||
| Analysis | WGS_Hobert | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006752 | |||
| Transcript | ZK524.2e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2e.1:c.1822-2196C>T | ||||
| Intron_number | 13/29 | ||||
| ZK524.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2c.1:c.799-2196C>T | ||||
| Intron_number | 5/21 | ||||
| ZK524.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2f.1:c.1831-2196C>T | ||||
| Intron_number | 13/29 | ||||
| ZK524.2j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2j.1:c.1786-2196C>T | ||||
| Intron_number | 13/28 | ||||
| ZK524.2k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2k.1:c.1777-2196C>T | ||||
| Intron_number | 13/28 | ||||
| ZK524.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2a.1:c.1822-2196C>T | ||||
| Intron_number | 13/29 | ||||
| ZK524.2i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2i.1:c.1831-2196C>T | ||||
| Intron_number | 13/28 | ||||
| ZK524.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2d.1:c.1822-1093C>T | ||||
| Intron_number | 13/30 | ||||
| ZK524.2h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK524.2h.1:c.799-2196C>T | ||||
| Intron_number | 5/20 | ||||
| Genetics | Map | I | |||
| Reference | WBPaper00036201 | ||||
| Method | WGS_Hobert |
