WormBase Tree Display for Variation: WBVar00308109
expand all nodes | collapse all nodes | view schema
| WBVar00308109 | Evidence | Paper_evidence | WBPaper00036201 | ||
|---|---|---|---|---|---|
| Name | Public_name | otn11288 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_IV:g.7441278A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | B0496 | |
| Flanking_sequences | TTTTCTCGATTTTTCTAGAAAGTTCTGGAACATTCCAGAATTTTTTCGAA | TTTCCAGAAGATTCTAGATTTCCAGAATTTTAGAATTTTCAGAAAATTTA | |||
| Mapping_target | B0496 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00029552 | ||||
| Laboratory | OTN | ||||
| Analysis | WGS_Hobert | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006814 | |||
| Transcript | B0496.3h.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.2:c.3318+452A>T | ||||
| Intron_number | 19/27 | ||||
| B0496.3a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.2:c.3387+452A>T | ||||
| Intron_number | 20/27 | ||||
| B0496.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3b.1:c.3582+452A>T | ||||
| Intron_number | 21/30 | ||||
| B0496.3i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3i.1:c.3633+452A>T | ||||
| Intron_number | 21/29 | ||||
| B0496.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3g.1:c.3318+452A>T | ||||
| Intron_number | 22/31 | ||||
| B0496.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.1:c.3387+452A>T | ||||
| Intron_number | 25/32 | ||||
| B0496.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3e.1:c.4227+452A>T | ||||
| Intron_number | 26/34 | ||||
| B0496.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3f.1:c.3435+452A>T | ||||
| Intron_number | 20/28 | ||||
| B0496.3h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.1:c.3318+452A>T | ||||
| Intron_number | 22/30 | ||||
| B0496.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3d.1:c.3510+452A>T | ||||
| Intron_number | 23/32 | ||||
| Genetics | Map | IV | |||
| Reference | WBPaper00036201 | ||||
| Method | WGS_Hobert |
