WormBase Tree Display for Variation: WBVar00309078

WBVar00309078 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn12257
    Other_name: OH8545_76890
      Y54G2A.17a.3:c.658-292T>C
      Y54G2A.17a.1:c.658-292T>C
      Y54G2A.17a.2:c.658-292T>C
      Y54G2A.17b.1:c.718-292T>C
    HGVSg: CHROMOSOME_IV:g.2881172A>G
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: ATTAGTTAAAATCGGAAATCTGACCGGCTTGTCAATGTCGCAGCGGCTGG AACATTTTTTTTTTGAAATCACCGTCAAATTACGAGTATACAATGTAATT
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029555
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00021882
    Transcript: Y54G2A.17a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17a.3:c.658-292T>C
        Intron_number: 2/7
      Y54G2A.17b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17b.1:c.718-292T>C
        Intron_number: 3/7
      Y54G2A.17a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17a.2:c.658-292T>C
        Intron_number: 3/8
      Y54G2A.17a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.17a.1:c.658-292T>C
        Intron_number: 3/8
  Genetics: Map: IV
  Reference: WBPaper00036201
  Method: WGS_Hobert