WormBase Tree Display for Variation: WBVar00314982
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| WBVar00314982 | Evidence | Paper_evidence | WBPaper00036201 | ||
|---|---|---|---|---|---|
| Name | Public_name | otn18161 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_IV:g.7439347C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | B0496 | |
| Flanking_sequences | GTTACGTAAGTATTTGTGGTAGAGAATGACAAAAACATAAAAACGATACC | TTCTCTCATCTAATTAGTCGAAATGAAGTGGTTCAAATGAACAATTGCTT | |||
| Mapping_target | B0496 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00029568 | ||||
| Laboratory | OTN | ||||
| Analysis | WGS_Hobert | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006814 | |||
| Transcript | B0496.3h.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.2:c.3180+46C>T | ||||
| Intron_number | 17/27 | ||||
| B0496.3a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.2:c.3249+46C>T | ||||
| Intron_number | 18/27 | ||||
| B0496.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3b.1:c.3444+46C>T | ||||
| Intron_number | 19/30 | ||||
| B0496.3i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3i.1:c.3495+46C>T | ||||
| Intron_number | 19/29 | ||||
| B0496.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3g.1:c.3180+46C>T | ||||
| Intron_number | 20/31 | ||||
| B0496.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3a.1:c.3249+46C>T | ||||
| Intron_number | 23/32 | ||||
| B0496.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3e.1:c.4089+46C>T | ||||
| Intron_number | 24/34 | ||||
| B0496.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3f.1:c.3297+46C>T | ||||
| Intron_number | 18/28 | ||||
| B0496.3h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3h.1:c.3180+46C>T | ||||
| Intron_number | 20/30 | ||||
| B0496.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0496.3d.1:c.3372+46C>T | ||||
| Intron_number | 21/32 | ||||
| Genetics | Map | IV | |||
| Reference | WBPaper00036201 | ||||
| Method | WGS_Hobert |
