WormBase Tree Display for Variation: WBVar00316263

WBVar00316263 Evidence: Paper_evidence: WBPaper00036201
  Name: Public_name: otn19442
    Other_name: OH9482_34812
      C52E12.11:n.33C>A
      C52E12.2a.2:c.599+706G>T
      C52E12.2a.1:c.599+706G>T
      C52E12.2b.1:c.599+706G>T
    HGVSg: CHROMOSOME_II:g.6997859G>T
  Sequence_details: SMap: S_parent: Sequence: C52E12
    Flanking_sequences: CTGAAGCGAATTTTCAATATCCCCGCGTTCATCCATCGTCTCCGCGCTGC TGACACGACGGTCGGTGGCTGTTCGGCAATCTTTAAATTTTGCATTATTT
    Mapping_target: C52E12
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00029572
    Laboratory: OTN
    Analysis: WGS_Hobert
    Status: Live
  Affects: Gene: WBGene00304189
      WBGene00006831
    Transcript: C52E12.2a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2a.2:c.599+706G>T
        Intron_number: 5/23
      C52E12.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2b.1:c.599+706G>T
        Intron_number: 5/24
      C52E12.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.2a.1:c.599+706G>T
        Intron_number: 5/23
    Pseudogene: C52E12.11 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: C52E12.11:n.33C>A
        cDNA_position: 33
        Exon_number: 1/2
  Genetics: Map: II
  Reference: WBPaper00036201
  Method: WGS_Hobert