WormBase Tree Display for Variation: WBVar00316822
expand all nodes | collapse all nodes | view schema
| WBVar00316822 | Evidence | Paper_evidence | WBPaper00036201 | ||
|---|---|---|---|---|---|
| Name | Public_name | otn20001 | |||
| Other_name | OH9482_114484 | ||||
| K11C4.5c.1:c.60+831C>T | |||||
| K11C4.5h.1:c.60+831C>T | |||||
| K11C4.5g.1:c.60+831C>T | |||||
| K11C4.5e.1:c.60+831C>T | |||||
| K11C4.5a.1:c.60+831C>T | |||||
| K11C4.5d.1:c.60+831C>T | |||||
| K11C4.5f.1:c.60+831C>T | |||||
| K11C4.5b.1:c.60+831C>T | |||||
| HGVSg | CHROMOSOME_V:g.6928059G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y57E12B | |
| Flanking_sequences | ATTACATGCCCTCATTTACAAATTAAATTAAATTGTCATTAATTTCTCTA | TTAAAATAAACGTGATATACATTTTTCCTCTTTAGGCTTAGAAAATGTTA | |||
| Mapping_target | Y57E12B | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00029572 | ||||
| Laboratory | OTN | ||||
| Analysis | WGS_Hobert | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006801 | |||
| Transcript | K11C4.5e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5e.1:c.60+831C>T | ||||
| Intron_number | 1/49 | ||||
| K11C4.5a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5a.1:c.60+831C>T | ||||
| Intron_number | 2/50 | ||||
| K11C4.5c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5c.1:c.60+831C>T | ||||
| Intron_number | 1/48 | ||||
| K11C4.5g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5g.1:c.60+831C>T | ||||
| Intron_number | 1/48 | ||||
| K11C4.5h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5h.1:c.60+831C>T | ||||
| Intron_number | 1/45 | ||||
| K11C4.5b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5b.1:c.60+831C>T | ||||
| Intron_number | 1/46 | ||||
| K11C4.5d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5d.1:c.60+831C>T | ||||
| Intron_number | 1/46 | ||||
| K11C4.5f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | K11C4.5f.1:c.60+831C>T | ||||
| Intron_number | 1/46 | ||||
| Genetics | Map | V | |||
| Reference | WBPaper00036201 | ||||
| Method | WGS_Hobert |
