WormBase Tree Display for Variation: WBVar00322197
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WBVar00322197 | Evidence | Paper_evidence | WBPaper00037659 | ||
---|---|---|---|---|---|
Name | Public_name | snx4625 | |||
Other_name | IS659_2226 | ||||
T21C12.1o.1:c.59-475C>A | |||||
T21C12.1d.1:c.1427+154C>A | |||||
T21C12.1f.1:c.563-475C>A | |||||
T21C12.1c.2:c.1463+154C>A | |||||
T21C12.1m.1:c.959+154C>A | |||||
T21C12.1c.1:c.1463+154C>A | |||||
T21C12.1e.1:c.1520+154C>A | |||||
HGVSg | CHROMOSOME_III:g.10530111C>A | ||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | |
Flanking_sequences | TTCCCAGTGCAATCGGCCACGTTTTCTGCATGCTTGCAGTGACTAAACCA | CTTCCAGAATGACGTCATCATCATCTTCCACATCATCAACTTGTGATCTA | |||
Mapping_target | T21C12 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00022165 | ||||
Laboratory | IS | ||||
Analysis | WGS_Jarriault | ||||
Status | Live | ||||
Affects | Gene | WBGene00006784 | |||
Transcript | T21C12.1o.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1o.1:c.59-475C>A | ||||
Intron_number | 1/5 | ||||
T21C12.1m.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1m.1:c.959+154C>A | ||||
Intron_number | 8/8 | ||||
T21C12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1d.1:c.1427+154C>A | ||||
Intron_number | 12/17 | ||||
T21C12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1c.1:c.1463+154C>A | ||||
Intron_number | 13/18 | ||||
T21C12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1e.1:c.1520+154C>A | ||||
Intron_number | 14/19 | ||||
T21C12.1c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1c.2:c.1463+154C>A | ||||
Intron_number | 13/14 | ||||
T21C12.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T21C12.1f.1:c.563-475C>A | ||||
Intron_number | 6/11 | ||||
Genetics | Map | III | |||
Reference | WBPaper00037659 | ||||
Method | WGS_Jarriault |