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WormBase Tree Display for Variation: WBVar00551151

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Name Class

WBVar00551151NamePublic_nameWBVar00551151
Other_namehaw131286
cewivar00091317
C52E12.2b.1:c.2346-112G>T
C52E12.2a.2:c.2346-606G>T
C52E12.2a.1:c.2346-606G>T
HGVSgCHROMOSOME_II:g.7005864G>T
Sequence_detailsSMapS_parentSequenceC52E12
Flanking_sequencesACGAGATAATCGAATTTAGACAATGGGGTGTGGCGCACGCCCCGTCGAACTCTAATTAATTGAGTTTTCAAACCTATTGCATAAACTCTCTCTGCTGCAT
Mapping_targetC52E12
Type_of_mutationSubstitutiongt
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (32)
LaboratoryAX
PersonWBPerson4037
AnalysisWGS_Yanai
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01307359
WBVar01240981
WBVar01373019
StatusLive
AffectsGeneWBGene00006831
TranscriptC52E12.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E12.2a.2:c.2346-606G>T
Intron_number13/23
C52E12.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E12.2b.1:c.2346-112G>T
Intron_number13/24
C52E12.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E12.2a.1:c.2346-606G>T
Intron_number13/23
ReferenceWBPaper00038208
WBPaper00037807
MethodWGS_Yanai