WormBase Tree Display for Variation: WBVar00565851
expand all nodes | collapse all nodes | view schema
| WBVar00565851 | Name | Public_name | WBVar00565851 | ||
|---|---|---|---|---|---|
| Other_name | haw145986 | ||||
| cewivar00025228 | |||||
| CE20261:p.Ala405= | |||||
| Y47D3B.10.1:c.1215T>C | |||||
| HGVSg | CHROMOSOME_III:g.11374391A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | T28D6 | |
| Flanking_sequences | TGCGGGTCATAATGTCCTCCGATTCCATAATTCGCAATCTGCAGCTCCTC | GCGGTCTCCATCTCCAAATTTGTCATATATCCGATTCGCTTGTTAACGGT | |||
| Mapping_target | T28D6 | ||||
| Type_of_mutation | Substitution | a | g | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (24) | |||||
| Laboratory | AX | ||||
| Person | WBPerson4037 | ||||
| Analysis | WGS_Yanai | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01269732 | |||
| WBVar01334810 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001077 | |||
| Transcript | Y47D3B.10.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y47D3B.10.1:c.1215T>C | ||||
| HGVSp | CE20261:p.Ala405= | ||||
| cDNA_position | 1216 | ||||
| CDS_position | 1215 | ||||
| Protein_position | 405 | ||||
| Exon_number | 6/9 | ||||
| Codon_change | gcT/gcC | ||||
| Amino_acid_change | A | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Yanai |
