WormBase Tree Display for Variation: WBVar00565852
expand all nodes | collapse all nodes | view schema
WBVar00565852 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00565852 | |||
Other_name | haw145987 | ||||
cewivar00198203 | |||||
Y47D3B.10.1:c.829C>T | |||||
CE20261:p.Leu277= | |||||
HGVSg | CHROMOSOME_III:g.11374777G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T28D6 | |
Flanking_sequences | AACCTCATTTCTGCACAGAGCCTCGTACATTGTTCGTTCAGTGTTTCCTA | GACAGAGTCGGGACGGCGGTTTTGGATTGGTGGGAGGTTCTTGCGCATGT | |||
Mapping_target | T28D6 | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001077 | |||
Transcript | Y47D3B.10.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y47D3B.10.1:c.829C>T | ||||
HGVSp | CE20261:p.Leu277= | ||||
cDNA_position | 830 | ||||
CDS_position | 829 | ||||
Protein_position | 277 | ||||
Exon_number | 6/9 | ||||
Codon_change | Cta/Tta | ||||
Amino_acid_change | L | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |