WormBase Tree Display for Variation: WBVar00570743
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WBVar00570743 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00570743 | |||
Other_name | haw150878 | ||||
cewivar00379811 | |||||
Y54G2A.3b.1:c.118-204A>C | |||||
Y54G2A.3a.1:c.118-204A>C | |||||
HGVSg | CHROMOSOME_IV:g.3013646A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | |
Flanking_sequences | TTAGGCTTAGGCTTAGGACTAGGTTTAGGCTCAGGCTTAGGTTTAGGCTT | GGCTTGGGCTTAGGCTTGGGCATAGGCTTAGGCTCAAGCTTATTTATTTC | |||
Mapping_target | Y54G2A | ||||
Type_of_mutation | Substitution | a | c | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Yanai | ||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021869 | |||
Transcript | Y54G2A.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.3a.1:c.118-204A>C | ||||
Intron_number | 2/4 | ||||
Y54G2A.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.3b.1:c.118-204A>C | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |