WormBase Tree Display for Variation: WBVar00584094
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WBVar00584094 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00584094 | |||
Other_name | haw164229 | ||||
cewivar00229468 | |||||
W08A12.1e.1:c.651+228G>C | |||||
W08A12.1b.2:c.726+228G>C | |||||
W08A12.1a.1:c.897+228G>C | |||||
W08A12.1b.3:c.726+228G>C | |||||
W08A12.1b.1:c.726+228G>C | |||||
W08A12.1c.1:c.708+228G>C | |||||
W08A12.1d.1:c.849+228G>C | |||||
HGVSg | CHROMOSOME_V:g.3699184G>C | ||||
Sequence_details | SMap | S_parent | Sequence | W08A12 | |
Flanking_sequences | GCGACTTGCCGGTTTGCCAATTTGCCGGAAATTTTCAGTTCCGCCAGTTT | CCGGTTTGCCGAAAATTCTTAATTCCGGCAATTTGCCGGTGTGCCGAAAT | |||
Mapping_target | W08A12 | ||||
Type_of_mutation | Substitution | g | c | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Yanai | |||||
Person | WBPerson4037 | ||||
Analysis | WGS_Yanai | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021078 | |||
Transcript | W08A12.1b.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.3:c.726+228G>C | ||||
Intron_number | 5/7 | ||||
W08A12.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1a.1:c.897+228G>C | ||||
Intron_number | 5/7 | ||||
W08A12.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1c.1:c.708+228G>C | ||||
Intron_number | 5/7 | ||||
W08A12.1b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.2:c.726+228G>C | ||||
Intron_number | 6/8 | ||||
W08A12.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1b.1:c.726+228G>C | ||||
Intron_number | 6/8 | ||||
W08A12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1d.1:c.849+228G>C | ||||
Intron_number | 3/5 | ||||
W08A12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W08A12.1e.1:c.651+228G>C | ||||
Intron_number | 3/4 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Yanai |