WormBase Tree Display for Variation: WBVar00600881

WBVar00600881 Name: Public_name: tm5482
    Other_name: ZC416.8a.1:c.-14-32_489+124del
      ZC416.8b.1:c.-1+1115_-1+1773del
    HGVSg: CHROMOSOME_IV:g.3622859_3623517del
  Sequence_details: SMap: S_parent: Sequence: ZC416
    Flanking_sequences: aagtctaaaaaccttccagaacaatttgat gcttcgggctggcctaggggctttttctca
    Mapping_target: ZC416
    Source_location: 7 CHROMOSOME_IV 3622858 3623518 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5482_external
      tm5482_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5482
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006756
      WBGene00000481
    Transcript: ZC416.8a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: ZC416.8a.1:c.-14-32_489+124del
        Intron_number: 1-3/5
        Exon_number: 2-3/6
      ZC416.8b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: ZC416.8b.1:c.-1+1115_-1+1773del
        Intron_number: 1/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 20411/20412-21070/21071 (659 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele