WormBase Tree Display for Variation: WBVar01232849

WBVar01232849 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01232849
    Other_name: cewivar00279437
      F42G2.7a.1:c.141G>T
      F42G2.7b.1:c.119+22G>T
      CE38710:p.Thr47=
    HGVSg: CHROMOSOME_II:g.2418777G>T
  Sequence_details: SMap: S_parent: Sequence: F42G2
    Flanking_sequences: TTTCTGCCAGTGATCCCAGGAACCCAGAGGTATGTTTCTGGCCCAGCAAC CAGAATTCACTGAACAAAAACCATTTTCAGGGTGCTGTCAACATGGCATA
    Mapping_target: F42G2
    Type_of_mutation: Substitution: g T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (16)
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539071507
    History: Acquires_merge: WBVar01298637
    Status: Live
  Affects: Gene: WBGene00044362
    Transcript: F42G2.7b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F42G2.7b.1:c.119+22G>T
        Intron_number: 3/4
      F42G2.7a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F42G2.7a.1:c.141G>T
        HGVSp: CE38710:p.Thr47=
        cDNA_position: 141
        CDS_position: 141
        Protein_position: 47
        Exon_number: 1/1
        Codon_change: acG/acT
        Amino_acid_change: T
  Reference: WBPaper00037807
  Method: WGS_De_Bono