WormBase Tree Display for Variation: WBVar01254605

WBVar01254605 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01254605
    Other_name: cewivar00283530
      F30H5.7:n.308A>G
      F30H5.6:n.122T>C
      F30H5.1.1:c.344+539T>C
    HGVSg: CHROMOSOME_III:g.492528T>C
  Sequence_details: SMap: S_parent: Sequence: F30H5
    Flanking_sequences: GCGAAAAAATTTTTTTTTCAAAATTTGAGGAGGTTGGGTATGCTAAATAT TAGCAGACCCAAGGAAAAATATTTAGCAGACCAAAGATAGGTATGCTAAA
    Mapping_target: F30H5
    Type_of_mutation: Substitution: t C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539091088
    Status: Live
  Affects: Gene: WBGene00198513
      WBGene00006781
      WBGene00197590
    Transcript: F30H5.7 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: F30H5.7:n.308A>G
        cDNA_position: 308
        Exon_number: 1/1
      F30H5.6 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: F30H5.6:n.122T>C
        cDNA_position: 122
        Exon_number: 1/1
      F30H5.1.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F30H5.1.1:c.344+539T>C
        Intron_number: 4/12
  Reference: WBPaper00037807
  Method: WGS_De_Bono