WormBase Tree Display for Variation: WBVar01254617
expand all nodes | collapse all nodes | view schema
| WBVar01254617 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01254617 | |||||
| Other_name | cewivar00283535 | ||||||
| F30H5.1.1:c.2605+119A>C | |||||||
| HGVSg | CHROMOSOME_III:g.500743A>C | ||||||
| Sequence_details | SMap | S_parent | Sequence | F30H5 | |||
| Flanking_sequences | CTTTAAAGATATATACACATTCCCCTTTAAAATTCTCGAAAAAAGAGGAA | GTGGATTTTTTGAATGCTCTGATAGACTCACAACACAAGCGCCTTTTTGA | |||||
| Mapping_target | F30H5 | ||||||
| Type_of_mutation | Substitution | a | C | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539091099 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00006781 | |||||
| Transcript | F30H5.1.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | F30H5.1.1:c.2605+119A>C | ||||||
| Intron_number | 11/12 | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
