WormBase Tree Display for Variation: WBVar01267983
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WBVar01267983 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01267983 | |||||
Other_name | cewivar00023802 | ||||||
T21C12.1e.1:c.*673+43A>G | |||||||
T21C12.1o.1:c.732+43A>G | |||||||
T21C12.1f.1:c.1236+43A>G | |||||||
T21C12.1c.1:c.*673+43A>G | |||||||
T21C12.1i.1:c.363+43A>G | |||||||
T21C12.9:n.101T>C | |||||||
T21C12.1h.1:c.684+43A>G | |||||||
T21C12.1d.1:c.*673+43A>G | |||||||
HGVSg | CHROMOSOME_III:g.10532382A>G | ||||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | |||
Flanking_sequences | CTCTTGTTGTAAGTGACCGAGATTTTGCATTTTGACAAACTGACACACTT | TTTTTTTCTAAAACTACATTATTTCCTTTGGAGTTTTATAAATATTGAAA | |||||
Mapping_target | T21C12 | ||||||
Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (14) | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539103129 | |||
Status | Live | ||||||
Affects | Gene | WBGene00198818 | |||||
WBGene00006784 | |||||||
Transcript | T21C12.1h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1h.1:c.684+43A>G | ||||||
Intron_number | 5/6 | ||||||
T21C12.1c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1c.1:c.*673+43A>G | ||||||
Intron_number | 18/18 | ||||||
T21C12.1e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1e.1:c.*673+43A>G | ||||||
Intron_number | 19/19 | ||||||
T21C12.9 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.9:n.101T>C | ||||||
cDNA_position | 101 | ||||||
Exon_number | 1/1 | ||||||
T21C12.1o.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1o.1:c.732+43A>G | ||||||
Intron_number | 5/5 | ||||||
T21C12.1d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1d.1:c.*673+43A>G | ||||||
Intron_number | 17/17 | ||||||
T21C12.1i.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1i.1:c.363+43A>G | ||||||
Intron_number | 2/2 | ||||||
T21C12.1f.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T21C12.1f.1:c.1236+43A>G | ||||||
Intron_number | 10/11 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |