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WormBase Tree Display for Variation: WBVar01269248

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Name Class

WBVar01269248EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01269248
Other_namecewivar00024750
Y47D3A.29.1:c.3938+54T>C
HGVSgCHROMOSOME_III:g.11152010T>C
Sequence_detailsSMapS_parentSequenceY47D3A
Flanking_sequencesCGATTTTTGATGGAAATTTGCCGATTTTCTGAAAATTTGGAAAAAAAACCGCTTAAAATCAGGAGAATTGAAGACTAATTGCCAACATTGAAATTTCCGG
Mapping_targetY47D3A
Type_of_mutationSubstitutiontCPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (11)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539104268
HistoryAcquires_mergeWBVar01334311
StatusLive
AffectsGeneWBGene00012936
WBGene00305760
TranscriptY48A6C.12
Y47D3A.29.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY47D3A.29.1:c.3938+54T>C
Intron_number8/10
ReferenceWBPaper00037807
MethodWGS_De_Bono