WormBase Tree Display for Variation: WBVar01269252
expand all nodes | collapse all nodes | view schema
WBVar01269252 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01269252 | |||||
Other_name | cewivar00388143 | ||||||
Y47D3A.29.1:c.4138+54G>T | |||||||
HGVSg | CHROMOSOME_III:g.11152842G>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y47D3A | |||
Flanking_sequences | CGTGTTTGCGAAATTTTATTGGAAAAAAATGGGAAAAATCCCTAGAAAAT | GGAAATTTCGGCGAAATTCAGCCAAGAATCGTGAGAATTAGCGGAAAATC | |||||
Mapping_target | Y47D3A | ||||||
Type_of_mutation | Substitution | g | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539104270 | |||
History | Acquires_merge | WBVar01334313 | |||||
Status | Live | ||||||
Affects | Gene | WBGene00012936 | |||||
WBGene00305760 | |||||||
Transcript | Y48A6C.12 | ||||||
Y47D3A.29.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | Y47D3A.29.1:c.4138+54G>T | ||||||
Intron_number | 9/10 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |