WormBase Tree Display for Variation: WBVar01283379
expand all nodes | collapse all nodes | view schema
WBVar01283379 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01283379 | |||||
Other_name | cewivar00505890 | ||||||
C48B6.6b.1:c.1985+20A>G | |||||||
C48B6.6a.1:c.1985+20A>G | |||||||
HGVSg | CHROMOSOME_I:g.6909897T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | C48B6 | |||
Flanking_sequences | ATTTTTTTGAATCAAATAGTGGAATAAAATCGAAAAGCTTGAAATAATTT | AAAGAGTTCTTTTCAATACCTGATATAAGTATTACAATCTCCAGATTCCC | |||||
Mapping_target | C48B6 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_De_Bono | |||||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539143321 | |||
Status | Live | ||||||
Affects | Gene | WBGene00004879 | |||||
Transcript | C48B6.6b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | C48B6.6b.1:c.1985+20A>G | ||||||
Intron_number | 13/41 | ||||||
C48B6.6a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | C48B6.6a.1:c.1985+20A>G | ||||||
Intron_number | 14/43 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |