WormBase Tree Display for Variation: WBVar01307364
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WBVar01307364 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01307364 | |||||
Other_name | cewivar00355790 | ||||||
C52E12.2b.1:c.4767+124C>T | |||||||
C52E12.2a.1:c.4635+124C>T | |||||||
C52E12.2a.2:c.4635+124C>T | |||||||
HGVSg | CHROMOSOME_II:g.7009900C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | C52E12 | |||
Flanking_sequences | TCAATTTTGTATTTCATTAAATTTCTAAATGATTGGTTTTTTGACACAAA | TTTTTTTGAAATCAGATTATGTTTGTATTTTTTCTGATTAGATTTACTTA | |||||
Mapping_target | C52E12 | ||||||
Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WGS_De_Bono | |||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539164907 | |||
Status | Live | ||||||
Affects | Gene | WBGene00006831 | |||||
Transcript | C52E12.2a.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | C52E12.2a.2:c.4635+124C>T | ||||||
Intron_number | 22/23 | ||||||
C52E12.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | C52E12.2b.1:c.4767+124C>T | ||||||
Intron_number | 23/24 | ||||||
C52E12.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | C52E12.2a.1:c.4635+124C>T | ||||||
Intron_number | 22/23 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |