WormBase Tree Display for Variation: WBVar01374878
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WBVar01374878 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01374878 | ||||
Other_name | cewivar00654638 | |||||
C52E12.2b.1:c.*288_*289insA | ||||||
C52E12.2a.2:c.*288_*289insA | ||||||
C52E12.2a.1:c.*288_*289insA | ||||||
HGVSg | CHROMOSOME_II:g.7010497_7010498insA | |||||
Sequence_details | SMap | S_parent | Sequence | C52E12 | ||
Flanking_sequences | GTCCCTAGCTATTTCCTGTTCGCTTTTTAGTCCCGGTTGAGCTGAATCTG | AAAAATATTGTTTTTTAAAATGTTTCCTTCAAAGAGTTTTTTAAAATTTT | ||||
Mapping_target | C52E12 | |||||
Type_of_mutation | Insertion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (36) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539050280 | ||
History | Acquires_merge | WBVar01405212 | ||||
WBVar01934876 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00006831 | ||||
Transcript | C52E12.2a.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C52E12.2a.2:c.*288_*289insA | |||||
cDNA_position | 5045-5046 | |||||
Exon_number | 24/24 | |||||
C52E12.2b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C52E12.2b.1:c.*288_*289insA | |||||
cDNA_position | 5375-5376 | |||||
Exon_number | 25/25 | |||||
C52E12.2a.1 | VEP_consequence | 3_prime_UTR_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C52E12.2a.1:c.*288_*289insA | |||||
cDNA_position | 5179-5180 | |||||
Exon_number | 24/24 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |