WormBase Tree Display for Variation: WBVar01399034
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| WBVar01399034 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01399034 | ||||
| Other_name | cewivar00680583 | |||||
| ZK524.2k.1:c.59-510del | ||||||
| ZK524.2j.1:c.59-510del | ||||||
| ZK524.2d.1:c.104-510del | ||||||
| ZK524.2a.1:c.104-510del | ||||||
| ZK524.2i.1:c.104-510del | ||||||
| ZK524.2f.1:c.104-510del | ||||||
| ZK524.2e.1:c.104-510del | ||||||
| HGVSg | CHROMOSOME_I:g.7424424del | |||||
| Sequence_details | SMap | S_parent | Sequence | C44E1 | ||
| Flanking_sequences | CTTTCACTCAAGTTTGAGCCAGAAATTGAGTTATAATTCACGTTGTTCTC | TTTTTTTTTTCTTTTCAACTAAAAAAAATATAGCTTCTTTTTTTATTGTT | ||||
| Mapping_target | C44E1 | |||||
| Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | ||||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
| Million_mutation_project_reanalysis | ||||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539194153 | ||
| History | Acquires_merge | WBVar01419856 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00006752 | ||||
| Transcript | ZK524.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2f.1:c.104-510del | |||||
| Intron_number | 2/29 | |||||
| ZK524.2j.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2j.1:c.59-510del | |||||
| Intron_number | 2/28 | |||||
| ZK524.2k.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2k.1:c.59-510del | |||||
| Intron_number | 2/28 | |||||
| ZK524.2i.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2i.1:c.104-510del | |||||
| Intron_number | 2/28 | |||||
| ZK524.2a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2a.1:c.104-510del | |||||
| Intron_number | 2/29 | |||||
| ZK524.2e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2e.1:c.104-510del | |||||
| Intron_number | 2/29 | |||||
| ZK524.2d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | ZK524.2d.1:c.104-510del | |||||
| Intron_number | 2/30 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
