WormBase Tree Display for Variation: WBVar01429638

WBVar01429638 Name: Public_name: tm5982
    Other_name: F08B6.4a.1:c.973-15_1499del
      F08B6.4b.1:c.400-15_926del
    HGVSg: CHROMOSOME_I:g.6763354_6763949del
  Sequence_details: SMap: S_parent: Sequence: F08B6
    Flanking_sequences: attgcctcatatggaagctctcctccttca tatatgttaattattgtttatttgcgttca
    Mapping_target: F08B6
    Source_location: 7 CHROMOSOME_I 6763353 6763950 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm5982_external
      tm5982_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 5982
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006819
    Transcript: F08B6.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F08B6.4b.1:c.400-15_926del
        cDNA_position: ?-933
        CDS_position: ?-926
        Protein_position: ?-309
        Intron_number: 4-5/7
        Exon_number: 5-6/8
      F08B6.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F08B6.4a.1:c.973-15_1499del
        cDNA_position: ?-1579
        CDS_position: ?-1499
        Protein_position: ?-500
        Intron_number: 4-5/7
        Exon_number: 5-6/8
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 8692/8693-9288/9289 (596 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele