WormBase Tree Display for Variation: WBVar01438346
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WBVar01438346 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01438346 | ||||
Other_name | cewivar00418320 | |||||
C52E12.2a.2:c.2825+19C>A | ||||||
C52E12.2a.1:c.2825+19C>A | ||||||
C52E12.2b.1:c.2966+19C>A | ||||||
HGVSg | CHROMOSOME_II:g.7007165C>A | |||||
Sequence_details | SMap | S_parent | Sequence | C52E12 | ||
Flanking_sequences | CTGTCAATTCAAGTATTGTTTAATTTAAAA | ATTTCCAATTGAAGAATTTTATTTTCAGTT | ||||
Mapping_target | C52E12 | |||||
Type_of_mutation | Substitution | c | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00005834 | From_analysis | WGS_Andersen | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00027661 | From_analysis | WGS_Andersen | ||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00027669 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193326407 | ||
dbSNP_ss | ss | 295502326 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006831 | ||||
Transcript | C52E12.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | C52E12.2a.2:c.2825+19C>A | |||||
Intron_number | 16/23 | |||||
C52E12.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C52E12.2b.1:c.2966+19C>A | |||||
Intron_number | 17/24 | |||||
C52E12.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | C52E12.2a.1:c.2825+19C>A | |||||
Intron_number | 16/23 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |