WormBase Tree Display for Variation: WBVar01438347

WBVar01438347 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01438347
    Other_name: C52E12.2b.1:c.3645C>T
      CE48050:p.Asn1168=
      C52E12.2a.1:c.3504C>T
      C52E12.2a.2:c.3504C>T
      CE47855:p.Asn1215=
    HGVSg: CHROMOSOME_II:g.7008138C>T
  Sequence_details: SMap: S_parent: Sequence: C52E12
    Flanking_sequences: TGAAGCTGCCTGGGATTCTTCTCTTCATAA TCTCCACTTTTGAATCGAGTTTCGAATTAC
    Mapping_target: C52E12
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193326408
        dbSNP_ss ss 295502327
    Status: Live
  Affects: Gene: WBGene00006831
    Transcript: C52E12.2a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C52E12.2a.2:c.3504C>T
        HGVSp: CE48050:p.Asn1168=
        cDNA_position: 3506
        CDS_position: 3504
        Protein_position: 1168
        Exon_number: 19/24
        Codon_change: aaC/aaT
        Amino_acid_change: N
      C52E12.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C52E12.2b.1:c.3645C>T
        HGVSp: CE47855:p.Asn1215=
        cDNA_position: 3845
        CDS_position: 3645
        Protein_position: 1215
        Exon_number: 20/25
        Codon_change: aaC/aaT
        Amino_acid_change: N
      C52E12.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C52E12.2a.1:c.3504C>T
        HGVSp: CE48050:p.Asn1168=
        cDNA_position: 3640
        CDS_position: 3504
        Protein_position: 1168
        Exon_number: 19/24
        Codon_change: aaC/aaT
        Amino_acid_change: N
  Reference: WBPaper00040707
  Method: WGS_Andersen