WormBase Tree Display for Variation: WBVar01443088
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WBVar01443088 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01443088 | ||||
Other_name | cewivar00618696 | |||||
F30H5.1.1:c.1413C>T | ||||||
CE01925:p.His471= | ||||||
HGVSg | CHROMOSOME_III:g.496490C>T | |||||
Sequence_details | SMap | S_parent | Sequence | F30H5 | ||
Flanking_sequences | TGAGCTCATTGTTGCAACTGTTAGCAAACA | GAAAGAGCTATTAATATGTTGAAAGTCGGA | ||||
Mapping_target | F30H5 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00031279 | From_analysis | WGS_Andersen | ||||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193330249 | ||
dbSNP_ss | ss | 295506168 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006781 | ||||
Transcript | F30H5.1.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | F30H5.1.1:c.1413C>T | |||||
HGVSp | CE01925:p.His471= | |||||
cDNA_position | 1415 | |||||
CDS_position | 1413 | |||||
Protein_position | 471 | |||||
Exon_number | 8/13 | |||||
Codon_change | caC/caT | |||||
Amino_acid_change | H | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |