WormBase Tree Display for Variation: WBVar01451459

WBVar01451459 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01451459
    Other_name: cewivar00035863
      Y54G2A.10b.1:c.-406A>T
      Y54G2A.10a.1:c.127-157A>T
    HGVSg: CHROMOSOME_IV:g.2800064A>T
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: CTAGCTCCCCCACTAGTGGAAAAAATATTT CTCTACGCCATTAGGAACAGCTGTATACAG
    Mapping_target: Y54G2A
    Type_of_mutation: Substitution: a t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (121)
    Laboratory: QX
    Person: WBPerson1730
    Analysis: Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193337116
        dbSNP_ss ss 295513035
    Status: Live
  Affects: Gene: WBGene00021875
    Transcript: Y54G2A.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.10a.1:c.127-157A>T
        Intron_number: 2/5
      Y54G2A.10b.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.10b.1:c.-406A>T
        cDNA_position: 359
        Exon_number: 1/5
  Reference: WBPaper00040707
  Method: WGS_Andersen