WormBase Tree Display for Variation: WBVar01451752
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WBVar01451752 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01451752 | ||||
Other_name | Y37E11C.1b.1:c.1971C>T | |||||
Y37E11C.1c.1:c.1503C>T | ||||||
CE31638:p.Ile657= | ||||||
CE31639:p.Ile501= | ||||||
Y37E11C.1a.1:c.2496C>T | ||||||
CE21557:p.Ile832= | ||||||
HGVSg | CHROMOSOME_IV:g.3525503C>T | |||||
Sequence_details | SMap | S_parent | Sequence | M57 | ||
Flanking_sequences | AAATCGCACCAAAGTAATGGAATCTTCCAT | GATTTTGGCGGCTCCGCGGCGAATCGGCCC | ||||
Mapping_target | M57 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00005305 | From_analysis | WGS_Andersen | |||
WBStrain00005315 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193337409 | ||
dbSNP_ss | ss | 295513328 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006769 | ||||
Transcript | Y37E11C.1c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | Y37E11C.1c.1:c.1503C>T | |||||
HGVSp | CE31639:p.Ile501= | |||||
cDNA_position | 1503 | |||||
CDS_position | 1503 | |||||
Protein_position | 501 | |||||
Exon_number | 4/4 | |||||
Codon_change | atC/atT | |||||
Amino_acid_change | I | |||||
Y37E11C.1b.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y37E11C.1b.1:c.1971C>T | |||||
HGVSp | CE31638:p.Ile657= | |||||
cDNA_position | 1971 | |||||
CDS_position | 1971 | |||||
Protein_position | 657 | |||||
Exon_number | 6/6 | |||||
Codon_change | atC/atT | |||||
Amino_acid_change | I | |||||
Y37E11C.1a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | Y37E11C.1a.1:c.2496C>T | |||||
HGVSp | CE21557:p.Ile832= | |||||
cDNA_position | 2496 | |||||
CDS_position | 2496 | |||||
Protein_position | 832 | |||||
Exon_number | 10/11 | |||||
Codon_change | atC/atT | |||||
Amino_acid_change | I | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |