WormBase Tree Display for Variation: WBVar01468287
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WBVar01468287 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01468287 | ||||
Other_name | ZK377.2b.1:c.73+199A>T | |||||
ZK377.2a.1:c.73+199A>T | ||||||
HGVSg | CHROMOSOME_X:g.3465571T>A | |||||
Sequence_details | SMap | S_parent | Sequence | ZK377 | ||
Flanking_sequences | GGGCATTCGTTTCCGCGCATTCAGTCAATC | TCGTTTTAATCGCTTTCTTCGACATGGGAA | ||||
Mapping_target | ZK377 | |||||
Type_of_mutation | Substitution | t | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193353589 | ||
dbSNP_ss | ss | 295529508 | ||||
Status | Live | |||||
Affects | Gene | WBGene00004729 | ||||
Transcript | ZK377.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | ZK377.2b.1:c.73+199A>T | |||||
Intron_number | 2/13 | |||||
ZK377.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK377.2a.1:c.73+199A>T | |||||
Intron_number | 2/13 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |