WormBase Tree Display for Variation: WBVar01471617
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WBVar01471617 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01471617 | ||||
Other_name | cewivar00489056 | |||||
F17E5.1b.1:c.280-15C>A | ||||||
F17E5.1a.1:c.1303-15C>A | ||||||
HGVSg | CHROMOSOME_X:g.12404374G>T | |||||
Sequence_details | SMap | S_parent | Sequence | F17E5 | ||
Flanking_sequences | CTATTTGGTTAAGTGTCTGAAAATGAAAAT | AAAAATTAACACTGATTCATCGACAGAGTT | ||||
Mapping_target | F17E5 | |||||
Type_of_mutation | Substitution | g | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (28) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193356919 | ||
dbSNP_ss | ss | 295532838 | ||||
Status | Live | |||||
Affects | Gene | WBGene00002991 | ||||
Transcript | F17E5.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F17E5.1a.1:c.1303-15C>A | |||||
Intron_number | 13/25 | |||||
F17E5.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F17E5.1b.1:c.280-15C>A | |||||
Intron_number | 2/14 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |