WormBase Tree Display for Variation: WBVar01472134
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| WBVar01472134 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01472134 | ||||
| Other_name | cewivar00617175 | |||||
| F54B11.3b.1:c.1446C>T | ||||||
| CE28236:p.Phe482= | ||||||
| F54B11.3a.1:c.1446C>T | ||||||
| CE27761:p.Phe482= | ||||||
| HGVSg | CHROMOSOME_X:g.13586830C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | F54B11 | ||
| Flanking_sequences | TGAAGCGCATCAAGTGGTATTTGCAATGTT | AAAGGAGGAATTGTTGAGACAGTTTCCTAT | ||||
| Mapping_target | F54B11 | |||||
| Type_of_mutation | Substitution | c | t | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00022867 | From_analysis | WGS_Andersen | |||
| WBStrain00022869 | From_analysis | WGS_Andersen | ||||
| WBStrain00022870 | From_analysis | WGS_Andersen | ||||
| WBStrain00022872 | From_analysis | WGS_Andersen | ||||
| WBStrain00022873 | From_analysis | WGS_Andersen | ||||
| WBStrain00022874 | From_analysis | WGS_Andersen | ||||
| WBStrain00022877 | From_analysis | WGS_Andersen | ||||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | Million_mutation_project_reanalysis | |||||
| WGS_Andersen | ||||||
| DB_info | Database | dbSNP_rs | rs | 193357436 | ||
| dbSNP_ss | ss | 295533355 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00006816 | ||||
| Transcript | F54B11.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | F54B11.3a.1:c.1446C>T | |||||
| HGVSp | CE28236:p.Phe482= | |||||
| cDNA_position | 1451 | |||||
| CDS_position | 1446 | |||||
| Protein_position | 482 | |||||
| Exon_number | 5/12 | |||||
| Codon_change | ttC/ttT | |||||
| Amino_acid_change | F | |||||
| F54B11.3b.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F54B11.3b.1:c.1446C>T | |||||
| HGVSp | CE27761:p.Phe482= | |||||
| cDNA_position | 1451 | |||||
| CDS_position | 1446 | |||||
| Protein_position | 482 | |||||
| Exon_number | 5/9 | |||||
| Codon_change | ttC/ttT | |||||
| Amino_acid_change | F | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
