WormBase Tree Display for Variation: WBVar01473028
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WBVar01473028 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01473028 | ||||
Other_name | cewivar00064172 | |||||
ZK662.4.2:c.174A>G | ||||||
ZK662.4.1:c.174A>G | ||||||
CE15381:p.Thr58= | ||||||
HGVSg | CHROMOSOME_X:g.15726383A>G | |||||
Sequence_details | SMap | S_parent | Sequence | ZK662 | ||
Flanking_sequences | TCTACGTCACCGTACCCTGCCAGCTCCAAC | CAGGAGACTGCCCACCATCTTGATGCGGAC | ||||
Mapping_target | ZK662 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (77) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193358330 | ||
dbSNP_ss | ss | 295534249 | ||||
Status | Live | |||||
Affects | Gene | WBGene00023497 | ||||
Transcript | ZK662.4.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | ZK662.4.1:c.174A>G | |||||
HGVSp | CE15381:p.Thr58= | |||||
cDNA_position | 180 | |||||
CDS_position | 174 | |||||
Protein_position | 58 | |||||
Exon_number | 3/10 | |||||
Codon_change | acA/acG | |||||
Amino_acid_change | T | |||||
ZK662.4.2 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | ZK662.4.2:c.174A>G | |||||
HGVSp | CE15381:p.Thr58= | |||||
cDNA_position | 186 | |||||
CDS_position | 174 | |||||
Protein_position | 58 | |||||
Exon_number | 3/11 | |||||
Codon_change | acA/acG | |||||
Amino_acid_change | T | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |