WormBase Tree Display for Variation: WBVar01473031
expand all nodes | collapse all nodes | view schema
WBVar01473031 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01473031 | ||||
Other_name | CE15381:p.Ile1240= | |||||
ZK662.4.1:c.3720T>C | ||||||
ZK662.4.2:c.3720T>C | ||||||
HGVSg | CHROMOSOME_X:g.15730959T>C | |||||
Sequence_details | SMap | S_parent | Sequence | ZK678 | ||
Flanking_sequences | CAAGTCTGGAACTGATAAGAATTCAGCCAT | GATTTGGCGAATATGTTAAACCCCGACGGT | ||||
Mapping_target | ZK678 | |||||
Type_of_mutation | Substitution | t | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023083 | From_analysis | WGS_Andersen | |||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193358333 | ||
dbSNP_ss | ss | 295534252 | ||||
Status | Live | |||||
Affects | Gene | WBGene00023497 | ||||
Transcript | ZK662.4.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | ZK662.4.1:c.3720T>C | |||||
HGVSp | CE15381:p.Ile1240= | |||||
cDNA_position | 3726 | |||||
CDS_position | 3720 | |||||
Protein_position | 1240 | |||||
Exon_number | 8/10 | |||||
Codon_change | atT/atC | |||||
Amino_acid_change | I | |||||
ZK662.4.2 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | ZK662.4.2:c.3720T>C | |||||
HGVSp | CE15381:p.Ile1240= | |||||
cDNA_position | 3732 | |||||
CDS_position | 3720 | |||||
Protein_position | 1240 | |||||
Exon_number | 8/11 | |||||
Codon_change | atT/atC | |||||
Amino_acid_change | I | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |