WormBase Tree Display for Variation: WBVar01513678
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WBVar01513678 | Name | Public_name | WBVar01513678 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00035874 | |||||||
Y54G2A.45c.1:c.27-402T>G | ||||||||
Y54G2A.45b.1:c.498-402T>G | ||||||||
Y54G2A.t4.1:n.69T>G | ||||||||
Y54G2A.45a.1:c.852-402T>G | ||||||||
HGVSg | CHROMOSOME_IV:g.2808423T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTCCCTGCCGTGTCCTCGGTAGTATAGTGGTGAGTATCCGCGTCTGTCACATGCGAGACCCGGGTTCAATTCCCGGCCGG | GAGAATCTTTTTGCAAGACCCAAAAAGAAG | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2808421 | 2808421 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (26) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044488 | ||||||
WBGene00023181 | ||||||||
Transcript | Y54G2A.t4 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.t4.1:n.69T>G | |||||||
cDNA_position | 69 | |||||||
Exon_number | 1/1 | |||||||
Y54G2A.45c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.45c.1:c.27-402T>G | |||||||
Intron_number | 1/1 | |||||||
Y54G2A.45b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.45b.1:c.498-402T>G | |||||||
Intron_number | 3/3 | |||||||
Y54G2A.45a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.45a.1:c.852-402T>G | |||||||
Intron_number | 8/9 | |||||||
Method | WGS_Flibotte |