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WormBase Tree Display for Variation: WBVar01513678

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Name Class

WBVar01513678NamePublic_nameWBVar01513678
Other_namecewivar00035874
Y54G2A.45c.1:c.27-402T>G
Y54G2A.45b.1:c.498-402T>G
Y54G2A.t4.1:n.69T>G
Y54G2A.45a.1:c.852-402T>G
HGVSgCHROMOSOME_IV:g.2808423T>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCTCCCTGCCGTGTCCTCGGTAGTATAGTGGTGAGTATCCGCGTCTGTCACATGCGAGACCCGGGTTCAATTCCCGGCCGGGAGAATCTTTTTGCAAGACCCAAAAAGAAG
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28084212808421From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (26)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00044488
WBGene00023181
TranscriptY54G2A.t4VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScY54G2A.t4.1:n.69T>G
cDNA_position69
Exon_number1/1
Y54G2A.45c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.45c.1:c.27-402T>G
Intron_number1/1
Y54G2A.45b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.45b.1:c.498-402T>G
Intron_number3/3
Y54G2A.45a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.45a.1:c.852-402T>G
Intron_number8/9
MethodWGS_Flibotte