WormBase Tree Display for Variation: WBVar01513739
expand all nodes | collapse all nodes | view schema
WBVar01513739 | Name | Public_name | WBVar01513739 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00035944 | |||||||
Y54G2A.14.2:c.70T>C | ||||||||
CE39862:p.Ser24Pro | ||||||||
Y54G2A.14.1:c.70T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.2840616A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | CTTACAAGTCTCCAATGCTATTGTCACCTG | AGCACATTGGGAATGTACCGAAGTGGTTAA | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2840614 | 2840614 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021879 | ||||||
Transcript | Y54G2A.14.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54G2A.14.1:c.70T>C | |||||||
HGVSp | CE39862:p.Ser24Pro | |||||||
cDNA_position | 70 | |||||||
CDS_position | 70 | |||||||
Protein_position | 24 | |||||||
Exon_number | 1/5 | |||||||
Codon_change | Tca/Cca | |||||||
Amino_acid_change | S/P | |||||||
Y54G2A.14.2 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | Y54G2A.14.2:c.70T>C | |||||||
HGVSp | CE39862:p.Ser24Pro | |||||||
cDNA_position | 204 | |||||||
CDS_position | 70 | |||||||
Protein_position | 24 | |||||||
Exon_number | 2/6 | |||||||
Codon_change | Tca/Cca | |||||||
Amino_acid_change | S/P | |||||||
Method | WGS_Flibotte |